Skip to content

Bayesian python toolbox for inference and forecast of the spread of the Coronavirus

License

Notifications You must be signed in to change notification settings

Priesemann-Group/covid19_inference

Repository files navigation

Bayesian inference and forecast of COVID-19, code repository

Documentation Status License: GPL v3 Code style: black

This is a Bayesian python toolbox for inference and forecast of the spread of the Coronavirus. We also provide a variety of data download utilities which allow quick and easy data exploration of Coronavirus related datasets.

The latest stable version is v0.5.0!

Please take notice of our disclaimer.

Installation:

Can be installed from pypi with

pip install covid19_inference

Related Publications

These research articles use this package:

  • Impact of the Euro 2020 championship on the spread of COVID-19
    • This research article is available on arXiv (updated on January 18 2023) and was published in NatureComm.
    • The code used to produce the figures is available in the other repository here but uses this package as dependency.
  • Inferring change points in the spread of COVID-19 reveals the effectiveness of interventions
    • This research article is available on arXiv (updated on April 13 2020) and was published in Science.
    • The code used to produce the figures is available in the other repository here.
  • Mutational signatures and transmissibility of SARS-CoV-2 Gamma and Lambda variants

If you are interested in our efforts and like to help us feel free to contact us. We are looking for support