Uparse python scripts packaged for ease of use

uparse/usearch comes with an optional set of python scripts. This package combines these scripts and makes them available system wide, hopefully reducing filesystem clutter and enhancing reproducibility.

fasta_number.py

uparse_fasta_number.py --fasta fastafile --prefix "awesome_experiment" > fastafile

fastq_strip_barcode_relabel_py

uparse_fastq_strip_barcode_relabel_py --fastq fastqfile --primer "ACCTTAC" --barcodefilename barcodes.txt --labelprefix "my_label" > output

faqual2fastq.py

uparse_faqual2fastq.py --fasta fastafile --qual qualfile > output

uc2otutab.py

uparse_uc2otutab.py --ucfile ucfile > output