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Computer vision engineer at @czbiohub-sf. For cell segmentation & tracking office hours, see link below
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Chan Zuckerberg Biohub
- SF
- https://jookuma.github.io
- @jobragantini
- https://calendly.com/jbragantini/office-hours
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royerlab/napari-segment-anything
royerlab/napari-segment-anything PublicSegment Anything Model (SAM) native Qt UI
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LIDS-UNICAMP/rethinking-interactive-image-segmentation
LIDS-UNICAMP/rethinking-interactive-image-segmentation PublicImplementation of "Rethinking Interactive Image Segmentation: Feature Space Annotation", Pattern Recognition 2022
Python 3
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LIDS-UNICAMP/grabber
LIDS-UNICAMP/grabber PublicGrabber: A Tool to Improve Convergence in Interactive Image Segmentation
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1,328 contributions in the last year
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Contribution activity
March 2025
Created 11 commits in 3 repositories
Created a pull request in royerlab/ultrack that received 1 comment
Opened 3 other pull requests in 2 repositories
royerlab/ultrack
1
open
1
merged
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Faster watershed oversegmentation using skimage
This contribution was made on Mar 20
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Adding option to control
min_area_factor
This contribution was made on Mar 6
PyIFT/pyift
1
merged
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Updating for numpy 2 C API
This contribution was made on Mar 6
Reviewed 2 pull requests in 2 repositories
czbiohub-sf/iohub
1 pull request
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Use sphinx-polyversion
This contribution was made on Mar 26
royerlab/dexpv2
1 pull request
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fancy threshold to intake max foreground
This contribution was made on Mar 13
Created an issue in weigertlab/spotiflow that received 2 comments
Enable numpy>2
Hi @AlbertDominguez,
Have you considered enabling numpy>=2
for spotiflow?
spotiflow/setup.cfg Line 29 in 7f1a3ec
We are having some con…
2
comments
53
contributions
in private repositories
Mar 1 – Mar 28