{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"pVACtools","owner":"griffithlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":10,"issueCount":79,"starsCount":127,"forksCount":58,"license":"BSD 3-Clause Clear License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T15:52:09.902Z"}},{"type":"Public","name":"civicpy","owner":"griffithlab","isFork":false,"description":"A python interface for the CIViC db application","allTopics":["civic"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":12,"issueCount":13,"starsCount":7,"forksCount":5,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-19T17:34:03.695Z"}},{"type":"Public","name":"neoag_vaccine_scripts","owner":"griffithlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":7,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-22T16:29:46.591Z"}},{"type":"Public","name":"VAtools","owner":"griffithlab","isFork":false,"description":"A set of tools to annotate VCF files with expression and readcount data","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":5,"starsCount":25,"forksCount":10,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-05T15:33:45.511Z"}},{"type":"Public","name":"docker-pvactools","owner":"griffithlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":7,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-08T20:40:06.261Z"}},{"type":"Public","name":"DeepNeo","owner":"griffithlab","isFork":true,"description":"identification of immunogenic neoepitopes","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":5,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-05T08:23:51.738Z"}},{"type":"Public","name":"open-data-registry","owner":"griffithlab","isFork":true,"description":"A registry of publicly available datasets on AWS","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":850,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-20T02:24:29.752Z"}},{"type":"Public","name":"sphinxcontrib-images","owner":"griffithlab","isFork":true,"description":"sphinxcontrib-images extension (moved to https://github.com/sphinx-contrib/images)","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":37,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-01-29T22:32:49.833Z"}},{"type":"Public","name":"sphinxcontrib-programoutput","owner":"griffithlab","isFork":true,"description":"Sphinx extension for capturing program output","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":17,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-01-13T20:49:45.156Z"}},{"type":"Public","name":"pVAC-Seq","owner":"griffithlab","isFork":false,"description":"DEPRECATED. This tool has been superseded by https://github.com/griffithlab/pVACtools","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":0,"starsCount":60,"forksCount":48,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-04-16T17:38:36.826Z"}},{"type":"Public","name":"civic2clinvar","owner":"griffithlab","isFork":false,"description":"extraction of CIViC variants into the clinvar submission format","allTopics":["civic"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-04-02T01:43:41.051Z"}},{"type":"Public","name":"convert_zero_one_based","owner":"griffithlab","isFork":false,"description":"Python CLI to convert between zero and one based genomic coordinate systems","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":3,"starsCount":21,"forksCount":6,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-07-27T16:47:57.305Z"}},{"type":"Public","name":"gnomad_annotation","owner":"griffithlab","isFork":false,"description":"Python package to add gnomAD allele frequencies to MGI annotated files","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":5,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-05-04T20:36:50.489Z"}},{"type":"Public","name":"igvnav","owner":"griffithlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":9,"starsCount":15,"forksCount":3,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-01-19T23:35:38.172Z"}},{"type":"Public","name":"civic-api-client","owner":"griffithlab","isFork":false,"description":"Example tools using the CIVIC API","allTopics":["civic"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":6,"starsCount":0,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-12-21T01:01:47.950Z"}},{"type":"Public","name":"civic-mapper","owner":"griffithlab","isFork":false,"description":"Tool to map variants to CIViC entries","allTopics":["civic"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-07-15T20:33:53.071Z"}}],"repositoryCount":16,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}