The jlpm bootstrap looks not to be working.

[i-aki-y]

Description

I tried to build jupyterlab-lsp according to CONTRIBUTING.md but could not because the jlpm bootstrap did not complete successfully.

I have checked them individually and found the following scripts have errors.

• jlpm deduplicate
• lerna bootstrap

Note, running only jlpm build completed without error.

Reproduce

# git clone https://github.com/jupyter-lsp/jupyterlab-lsp.git
# cd jupyterlab-lsp
# conda env update -n jupyterlab-lsp --file binder/environment.yml
# conda activate jupyterlab-lsp
# bash binder/postBuild
+ jlpm bootstrap
Usage Error: Couldn't find the node_modules state file - running an install might help (findPackageLocation)

$ yarn run [--inspect] [--inspect-brk] [-T,--top-level] [-B,--binaries-only] <scriptName> ...

# jlpm
# bash binder/postBuild
+ jlpm bootstrap
[1] ➤ YN0000: ┌ Project validation
[1] ➤ YN0057: │ root-workspace-0b6124: 'nohoist' is deprecated, please use 'installConfig.hoistingLimits' instead
[1] ➤ YN0000: └ Completed
[1] ➤ YN0000: ┌ Resolution step
SyntaxError: Unknown token: { line: 3, col: 2, type: 'INVALID', value: undefined } 3:2 in lockfile
    at Parser.unexpected (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5064:11)
    at Parser.parse (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5193:14)
    at parse (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5262:17)
    at module.exports.exports.default (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:4835:96)
    at parseYarnLock (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/index.js:7:42)
    at fixDuplicates (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/index.js:123:18)
    at Object.<anonymous> (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/cli.js:52:60)
    at Module._compile (node:internal/modules/cjs/loader:1254:14)
    at Module._extensions..js (node:internal/modules/cjs/loader:1308:10)
    at Module.load (node:internal/modules/cjs/loader:1117:32)
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp-example-extractor@workspace:packages/_example-extractor doesn't provide @codemirror/state (pb2869), requested by @jupyter-lsp/jupyterlab-lsp
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp-example-extractor@workspace:packages/_example-extractor doesn't provide @codemirror/view (pad4db), requested by @jupyter-lsp/jupyterlab-lsp
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp-metapackage@workspace:packages/metapackage doesn't provide @codemirror/state (p09a35), requested by @jupyter-lsp/jupyterlab-lsp
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp-metapackage@workspace:packages/metapackage doesn't provide @codemirror/view (p49198), requested by @jupyter-lsp/jupyterlab-lsp
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp@workspace:packages/jupyterlab-lsp doesn't provide @rjsf/utils (p61ef3), requested by @rjsf/validator-ajv8
[1] ➤ YN0002: │ @jupyter-lsp/jupyterlab-lsp@workspace:packages/jupyterlab-lsp [31461] doesn't provide @rjsf/utils (p3362a), requested by @rjsf/validator-ajv8
[1] ➤ YN0002: │ @jupyterlab/services@npm:7.0.5 doesn't provide react (p4d970), requested by @jupyterlab/settingregistry
[1] ➤ YN0002: │ @jupyterlab/services@npm:7.0.6 doesn't provide react (p142a3), requested by @jupyterlab/settingregistry
[1] ➤ YN0002: │ root-workspace-0b6124@workspace:. doesn't provide webpack (p227f7), requested by source-map-loader
[1] ➤ YN0000: │ Some peer dependencies are incorrectly met; run yarn explain peer-requirements <hash> for details, where <hash> is the six-letter p-prefixed code
[1] ➤ YN0000: └ Completed in 0s 381ms
[1] ➤ YN0000: ┌ Fetch step
[1] ➤ YN0000: └ Completed in 0s 412ms
[1] ➤ YN0000: ┌ Link step
[1] ➤ YN0000: └ Completed in 0s 608ms
[1] ➤ YN0000: Done with warnings in 1s 505ms
Job [1], 'jlpm' has ended

Run individual command:

# jlpm deduplicate
SyntaxError: Unknown token: { line: 3, col: 2, type: 'INVALID', value: undefined } 3:2 in lockfile
    at Parser.unexpected (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5064:11)
    at Parser.parse (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5193:14)
    at parse (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:5262:17)
    at module.exports.exports.default (/jupyterlab-lsp/node_modules/@yarnpkg/lockfile/index.js:4835:96)
    at parseYarnLock (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/index.js:7:42)
    at fixDuplicates (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/index.js:123:18)
    at Object.<anonymous> (/jupyterlab-lsp/node_modules/yarn-deduplicate/dist/cli.js:52:60)
    at Module._compile (node:internal/modules/cjs/loader:1254:14)
    at Module._extensions..js (node:internal/modules/cjs/loader:1308:10)
    at Module.load (node:internal/modules/cjs/loader:1117:32)

# jlpm lerna bootstrap
lerna notice cli v6.5.1
lerna info versioning independent
lerna info bootstrap root only
Unknown Syntax Error: Unsupported option name ("--mutex").

$ yarn install [--json] [--immutable] [--immutable-cache] [--check-cache] [--inline-builds] [--mode #0]
lerna ERR! yarn install --mutex network:42424 --non-interactive exited 1 in 'jupyterlab-lsp'
lerna ERR! yarn install --mutex network:42424 --non-interactive exited 1 in 'jupyterlab-lsp'

Expected behavior

The command (jlpm bootstrap) should be completed without error.

Context

I confirmed in this docker image

docker pull continuumio/miniconda3
docker run -i -t continuumio/miniconda3 /bin/bash

Just after the conda activate jupyterlab-lsp:

# jlpm --version
3.5.0
# node --version
v18.15.0
# pip list | grep jupyter
jupyter_client                8.6.0
jupyter_core                  5.5.0
jupyter-events                0.9.0
jupyter-lsp                   2.2.0
jupyter_server                2.10.1
jupyter_server_terminals      0.4.4
jupyterlab                    4.0.9
jupyterlab-pygments           0.2.2
jupyterlab-robotmode          0.3.1
jupyterlab_server             2.25.2
jupyterlab-widgets            3.0.9

Required: installed server extensions

Paste the output from running `jupyter server extension list` (JupyterLab >= 3)
or `jupyter serverextension list` (JupyterLab < 3) from the command line here.
You may want to sanitize the paths in the output.

Required: installed lab extensions

Paste the output from running `jupyter labextension list` from the command line here.
You may want to sanitize the paths in the output.

Troubleshoot Output

Paste the output from running `jupyter troubleshoot` from the command line here.
You may want to sanitize the paths in the output.

Command Line Output

Paste the output from your command line running `jupyter lab` here, use `--debug` if possible.

Browser Output (recommended for all interface issues)

Paste the output from your browser JavaScript console replacing the text in here.
To learn how to open the developer tools in your browser:

https://developer.mozilla.org/en-US/docs/Learn/Common_questions/What_are_browser_developer_tools#How_to_open_the_devtools_in_your_browser

If too many messages accumulated after many hours of working in JupyterLab,

consider refreshing the window and then reproducing the bug to reduce the noise in the logs.

[krassowski]

Thank you for the report, #1021 should address this.