Remove the ruff to ruff check alias

[MichaReiser]

We deprecated the ruff to ruff check, ruff --explain to ruff rule, ruff --generate-shell-completion to ruff generate-shell-completion and the ruff --clean to ruff clean aliases in 0.3. We should remove them in a subsequent minor release.

#10169

Note that the ruff-lsp used the ruff to ruff check alias astral-sh/ruff-lsp#392