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JVM crash happens on Ubuntu 16.04 when cpp lib is built with Mimalloc allocator instead of jemalloc. Below is the stacktrace from core dump:
(gdb) bt #0 0x00007fbb13ed3428 in __GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:54 #1 0x00007fbb13ed502a in __GI_abort () at abort.c:89 #2 0x00007fbb131d7149 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so #3 0x00007fbb1338ad27 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so #4 0x00007fbb131e0e4f in JVM_handle_linux_signal () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so #5 0x00007fbb131d3e48 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so #6 <signal handler called> #7 mi_page_free_list_extend (heap=0x0, page=0x7fbb133de221, extend=140440661634032, stats=0x7fbae3bfac00)
` at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/page.c:449#8 0x00007fbaaedff652 in _mi_segment_page_of (segment=0x7fbaaedff652 <_mi_segment_page_of+18>, p=0x7fbae3bfab30) \ at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/include/mimalloc-internal.h:232 \#9 0x00007fbaaedff7bb in mi_heap_malloc_zero_aligned_at (heap=0x7fbaaedff652 <_mi_segment_page_of+18>, size=140440661633840, alignment=140439800379296, \ offset=139646092684112, zero=187) at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/alloc-aligned.c:31 \#10 0x00007fbaaedff7e0 in mi_heap_malloc_zero_aligned_at (heap=0x7fbab069f7a0 <_mi_heap_empty>, size=139642473343568, alignment=140439774558139, \ offset=140440661633872, zero=186) at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/alloc-aligned.c:33#11 0x00007fbaaee00941 in mi_option_init (desc=0x7fbaaedff652 <_mi_segment_page_of+18>) \ at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/options.c:204#12 0x00007fbb13ed7ff8 in __run_exit_handlers (status=1, listp=0x7fbb142625f8 <__exit_funcs>, run_list_atexit=run_list_atexit@entry=true) at exit.c:82#13 0x00007fbb13ed8045 in __GI_exit (status=) at exit.c:104#14 0x00007fbb12f76a7c in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#15 0x00007fbb13391587 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#16 0x00007fbb1338ede7 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#17 0x00007fbb133900cf in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#18 0x00007fbb133905f2 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#19 0x00007fbb131d6102 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so#20 0x00007fbb1386a6ba in start_thread (arg=0x7fbae3bfb700) at pthread_create.c:333#21 0x00007fbb13fa541d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:109`
Uwe Korn / @xhochy:
We should simply skip tests in the Java build that is done in the Python job. They consume precious runtime for something that is tested in another job already.
This seems to happen more or less frequently on the Python - Java build (with jpype enabled).
See warnings and errors starting from https://travis-ci.org/apache/arrow/jobs/583069089#L6662
Additional info:
JVM crash happens on Ubuntu 16.04 when cpp lib is built with Mimalloc allocator instead of jemalloc. Below is the stacktrace from core dump:
(gdb) bt
#0 0x00007fbb13ed3428 in __GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:54
#1 0x00007fbb13ed502a in __GI_abort () at abort.c:89
#2 0x00007fbb131d7149 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so
#3 0x00007fbb1338ad27 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so
#4 0x00007fbb131e0e4f in JVM_handle_linux_signal () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so
#5 0x00007fbb131d3e48 in ?? () from /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server/libjvm.so
#6 <signal handler called>
#7 mi_page_free_list_extend (heap=0x0, page=0x7fbb133de221, extend=140440661634032, stats=0x7fbae3bfac00)
` at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/page.c:449
\
at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/include/mimalloc-internal.h:232\
#9 0x00007fbaaedff7bb in mi_heap_malloc_zero_aligned_at (heap=0x7fbaaedff652 <_mi_segment_page_of+18>, size=140440661633840, alignment=140439800379296,\
offset=139646092684112, zero=187) at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/alloc-aligned.c:31\
#10 0x00007fbaaedff7e0 in mi_heap_malloc_zero_aligned_at (heap=0x7fbab069f7a0 <_mi_heap_empty>, size=139642473343568, alignment=140439774558139,\
offset=140440661633872, zero=186) at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/alloc-aligned.c:33\
at /home/prudhvi/arrow/cpp-build/mimalloc_ep-prefix/src/mimalloc_ep/src/options.c:204Reporter: Antoine Pitrou / @pitrou
Assignee: Prudhvi Porandla / @pprudhvi
PRs and other links:
Note: This issue was originally created as ARROW-6509. Please see the migration documentation for further details.
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